Enhancer and super‐enhancer: Positive regulators in gene transcription - Peng - 2018 - Animal Models and Experimental Medicine - Wiley Online Library
ChIP-GSM: Inferring active transcription factor modules to predict functional regulatory elements | PLOS Computational Biology
Frontiers | Diversity and Emerging Roles of Enhancer RNA in Regulation of Gene Expression and Cell Fate
A High-Resolution Map of Human Enhancer RNA Loci Characterizes Super- enhancer Activities in Cancer - ScienceDirect
Transcriptionally active enhancers in human cancer cells | Molecular Systems Biology
Dissecting super-enhancer heterogeneity: time to re-examine cancer subtypes?: Trends in Genetics
Altered Enhancer and Promoter Usage Leads to Differential Gene Expression in the Normal and Failed Human Heart | Circulation: Heart Failure
C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution | Nature Communications
Genome Enhancer analysis summary - geneXplain
Enhanced Identification of Transcriptional Enhancers Provides Mechanistic Insights into Diseases: Trends in Genetics
Connectome and regulatory hubs of CAGE highly active enhancers | Scientific Reports
Technology Overview | K.K. DNAFORM
Solving the transcription start site identification problem with ADAPT-CAGE: a Machine Learning algorithm for the analysis of CAGE data | Scientific Reports
Systematic analysis of enhancer regulatory circuit perturbation driven by copy number variations in malignant glioma
Predicting enhancers in mammalian genomes using supervised hidden Markov models | BMC Bioinformatics | Full Text
Cells | Free Full-Text | Enhancer Dysfunction in 3D Genome and Disease
IJMS | Free Full-Text | Fish-Ing for Enhancers in the Heart
Frontiers | Mapping Mammalian Cell-type-specific Transcriptional Regulatory Networks Using KD-CAGE and ChIP-seq Data in the TC-YIK Cell Line
CAGE - A highly sensitive and precise means of gene expression analysis.
Activity-by-contact model of enhancer–promoter regulation from thousands of CRISPR perturbations | Nature Genetics
Homer Software and Data Download
De novo identification of enhancers with higher sensitivity in NET-CAGE... | Download Scientific Diagram
NET-CAGE characterizes the dynamics and topology of human transcribed cis-regulatory elements | Nature Genetics
Frontiers | Identification and Analysis of p53-Regulated Enhancers in Hepatic Carcinoma
Altered Enhancer and Promoter Usage Leads to Differential Gene Expression in the Normal and Failed Human Heart | Circulation: Heart Failure
The GBAF chromatin remodeling complex binds H3K27ac and mediates enhancer transcription | bioRxiv
